BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB030A05LP1|AL429146
(843 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1059 1555 0.0
>3x_Contig1059
Length = 3822
Score = 1555 bits (784), Expect = 0.0
Identities = 785/786 (99%)
Strand = Plus / Plus
Query: 58 ggtatctcaagcaatcttcaaatgtcttttcgagtaaaacatcagtttttccgtccccct 117
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ggtatctcaagcaatcttcaaatgtcttttcgagtaaaacatcagtttttccgtccccct 60
Query: 118 acattcttttctaggctccaaaatagtaaacagctttgatgcgatgagatgcaatgagat 177
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 acattcttttctaggctccaaaatagtaaacagctttgatgcgatgagatgcaatgagat 120
Query: 178 gaacgcacttttgagataaattatatcagccgtttcttctctgaccaatgatatcacatt 237
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gaacgcacttttgagataaattatatcagccgtttcttctctgaccaatgatatcacatt 180
Query: 238 actggctaatcgagcgtgaactgtttagcgcccccatcccgatttcttccgacgaaaaat 297
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 actggctaatcgagcgtgaactgtttagcgcccccatcccgatttcttccgacgaaaaat 240
Query: 298 taggaaaaattacgccacaaagtggtaaactgttggtgaaagtggggggtgtggaggggc 357
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 taggaaaaattacgccacaaagtggtaaactgttggtgaaagtggggggtgtggaggggc 300
Query: 358 aacttctcattttggagttttttgggtgcccaaaagagcggaagttcttctcgaacaacg 417
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 aacttctcattttggagttttttgggtgcccaaaagagcggaagttcttctcgaacaacg 360
Query: 418 gtttctggaaggatggtcacgcaaactgaaactgcgagattcgaaaaatcaataaaatag 477
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gtttctggaaggatggtcacgcaaactgaaactgcgagattcgaaaaatcaataaaatag 420
Query: 478 ttgcatcacgtgatacgaaaatcctgaaagacttttcggtaatatacggtgggtagttta 537
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 ttgcatcacgtgatacgaaaatcctgaaagacttttcggtaatatacggtgggtagttta 480
Query: 538 ccttatgggttgtccttcatcgatataattaataaagttagttacgtaaaatattattgt 597
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 ccttatgggttgtccttcatcgatataattaataaagttagttacgtaaaatattattgt 540
Query: 598 acatatgaaacgagaatcggtatacatggcatatgatgaacttctaatgttcagaacttt 657
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 acatatgaaacgagaatcggtatacatggcatatgatgaacttctaatgttcagaacttt 600
Query: 658 tcatgacaggtaagagggttagtcttttaaacatacaaggctgagtcttcttttgcagca 717
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 tcatgacaggtaagagggttagtcttttaaacatacaaggctgagtcttcttttgcagca 660
Query: 718 gaggtagaaactgtgacagatgacaatggagtgtctgccacacttggtaaagaggattct 777
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 gaggtagaaactgtgacagatgacaatggagtgtctgccacacttggtaaagaggattct 720
Query: 778 tcttgttgttccttttggatctttcttcttagcatacttctgccggraagaatatctccg 837
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 721 tcttgttgttccttttggatctttcttcttagcatacttctgccggaaagaatatctccg 780
Query: 838 atctcg 843
||||||
Sbjct: 781 atctcg 786
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6370
Number of Sequences: 1807
Number of extensions: 6370
Number of successful extensions: 71
Number of sequences better than 1.0e-20: 1
length of query: 843
length of database: 10,358,551
effective HSP length: 16
effective length of query: 827
effective length of database: 10,329,639
effective search space: 8542611453
effective search space used: 8542611453
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)